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phipsonlab

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  1. speckle speckle Public

    R package for analysing single cell data

    R 59 6

  2. SuperCellCyto SuperCellCyto Public

    SuperCell for Cytometry data

    R 13 1

  3. cellXY cellXY Public

    R package to predict sex of single cells and identify Male/Female doublets using machine learning approaches

    R 7 7

  4. speckle_old speckle_old Public

    R package for analysing single cell data

    R 6 1

  5. NextClone NextClone Public

    Nextflow pipeline for extracting and counting clonal barcodes

    Python 4 4

  6. jazzPanda jazzPanda Public

    A hybrid approach to find spatially relevant marker genes in image based spatial transcriptomics data

    R 4 1

Repositories

Showing 10 of 15 repositories
  • jazzPanda Public

    A hybrid approach to find spatially relevant marker genes in image based spatial transcriptomics data

    phipsonlab/jazzPanda’s past year of commit activity
    R 4 GPL-3.0 1 0 0 Updated Nov 19, 2025
  • SuperCellCyto Public

    SuperCell for Cytometry data

    phipsonlab/SuperCellCyto’s past year of commit activity
    R 13 GPL-3.0 1 0 0 Updated Oct 14, 2025
  • phipson-lab-website Public
    phipsonlab/phipson-lab-website’s past year of commit activity
    HTML 0 BSD-3-Clause 0 0 0 Updated Aug 18, 2025
  • NextClone Public

    Nextflow pipeline for extracting and counting clonal barcodes

    phipsonlab/NextClone’s past year of commit activity
    Python 4 MIT 4 0 0 Updated Jun 18, 2025
  • cellXY Public

    R package to predict sex of single cells and identify Male/Female doublets using machine learning approaches

    phipsonlab/cellXY’s past year of commit activity
    R 7 GPL-3.0 7 5 1 Updated Nov 11, 2024
  • jazzPanda_vignette Public
    phipsonlab/jazzPanda_vignette’s past year of commit activity
    0 0 0 0 Updated Sep 10, 2024
  • NextClone-analysis Public

    Analysis for NextClone pipeline

    phipsonlab/NextClone-analysis’s past year of commit activity
    R 0 0 0 0 Updated Jun 14, 2024
  • spaceMarker Public
    phipsonlab/spaceMarker’s past year of commit activity
    R 3 GPL-3.0 0 0 0 Updated May 30, 2024
  • SuperCellCyto-analysis Public

    Code to reproduce analysis done for SuperCellCyto paper

    phipsonlab/SuperCellCyto-analysis’s past year of commit activity
    R 0 0 0 0 Updated Jan 31, 2024
  • CloneDetective Public

    R Package for interrogating clonal data

    phipsonlab/CloneDetective’s past year of commit activity
    R 0 MIT 1 1 0 Updated Nov 14, 2023
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