From edc560fba9a5b67821adb63dcd8d460a4a288670 Mon Sep 17 00:00:00 2001 From: Sean Date: Fri, 4 Feb 2022 15:36:26 -0500 Subject: [PATCH 1/2] Capture transcript in ACMG model --- varsome_api/models/elements/acmg.py | 1 + 1 file changed, 1 insertion(+) diff --git a/varsome_api/models/elements/acmg.py b/varsome_api/models/elements/acmg.py index 7650b8d..766da61 100644 --- a/varsome_api/models/elements/acmg.py +++ b/varsome_api/models/elements/acmg.py @@ -40,3 +40,4 @@ class ACMG(models.Base): classifications = fields.ListField(required=False, items_types=(ACMGClassification,), help_text="ACMG Classifications") verdict = fields.EmbeddedField(ACMGVerdict, nullable=True, required=False, help_text="ACMG Verdict") + transcript = fields.StringField(required=False, nullable=True) From 43ebeb65baf94e745a2f0e8ec326ed09f681bf24 Mon Sep 17 00:00:00 2001 From: Sean Date: Wed, 23 Feb 2022 15:47:09 -0500 Subject: [PATCH 2/2] Update setup.py --- setup.py | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/setup.py b/setup.py index c77e73f..5144ac2 100755 --- a/setup.py +++ b/setup.py @@ -9,7 +9,8 @@ here = path.abspath(path.dirname(__file__)) installation_requirements = [ 'requests>=2.0.0, <3.0.0', - 'PyVCF>=0.6.8', + #'PyVCF>=0.6.8', + 'PyVCF>=0.4.3', 'jsonmodels>=2.2' ] if sys.version_info < (3, 4):