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Merge branch 'pre/2.6' into develop
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‎.binder/requirements.txt‎

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tidy3d
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tmm
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nlopt
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tqdm
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gdspy

‎.gitattributes‎

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# Linguist-vendored files
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docs/* linguist-vendored
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notebooks/* linguist-vendored
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tests/* linguist-vendored
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# Disable linguist detection for IPython notebooks
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*.ipynb linguist-detectable=false
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# Mark IPython notebooks as generated files
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*.ipynb linguist-generated=true
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CHANGELOG.md merge=union
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# Specify merge attributes for CHANGELOG.md
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CHANGELOG.md merge=union
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# Specify diff and merge attributes for IPython notebooks
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*.ipynb diff=jupyternotebook
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*.ipynb merge=jupyternotebook

‎.gitconfig‎

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[diff "jupyternotebook"]
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command = git-nbdiffdriver diff
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[merge "jupyternotebook"]
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driver = git-nbmergedriver merge %O %A %B %L %P
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name = jupyter notebook merge driver
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[difftool "nbdime"]
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cmd = git-nbdifftool diff \"$LOCAL\" \"$REMOTE\" \"$BASE\"
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[difftool]
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prompt = false
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[mergetool "nbdime"]
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cmd = git-nbmergetool merge \"$BASE\" \"$LOCAL\" \"$REMOTE\" \"$MERGED\"
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[mergetool]
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prompt = false

‎.github/workflows/release.yml‎

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name: Tidy3d Release
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name: "tidy3d-release"
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permissions:
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contents: write
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on:
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push:
@@ -12,6 +15,8 @@ jobs:
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- uses: actions/checkout@master
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- name: Release
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uses: softprops/action-gh-release@v1
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with:
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generate_release_notes: true
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env:
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GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
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pypi-release:

‎.github/workflows/run_tests.yml‎

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name: Tidy3dTests
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name: "tidy3d-frontend-tests"
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on:
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workflow_dispatch:
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- 'pre/*'
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jobs:
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pre-commit:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- name: Set up Python
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uses: actions/setup-python@v5
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with:
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python-version: "3.10"
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submodules: 'recursive'
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- name: Test pre-commit hooks
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run: |
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python -m pip install --upgrade pip
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pip install pre-commit
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pre-commit run # this should be really more agressive
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test-latest-submodules:
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runs-on: ubuntu-latest
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steps:
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- name: Checkout repository with submodules
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uses: actions/checkout@v4
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with:
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submodules: 'recursive'
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# This fetches only a single branch by default, so additional fetch is needed
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fetch-depth: 0 # Optionally, set to 0 to fetch all history for all branches and tags
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- name: Determine current branch or PR ref
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id: get_branch
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run: |
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if [[ "${{ github.event_name }}" == "pull_request" ]]; then
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echo "BRANCH_NAME=${{ github.event.pull_request.base.ref }}" >> $GITHUB_ENV
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else
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echo "BRANCH_NAME=$(echo $GITHUB_REF | sed 's|refs/heads/||')" >> $GITHUB_ENV
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fi
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echo $BRANCH_NAME
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shell: bash
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- name: Initialize and update submodule
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run: |
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git submodule update --init --recursive
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- name: Check if submodules are up to date
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shell: bash
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run: |
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NOTEBOOKS_PATH=docs/notebooks
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FAQ_PATH=docs/faq
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# Checking out Notebooks submodule with the same branch as the main project
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echo "Checking $NOTEBOOKS_PATH for updates..."
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cd $NOTEBOOKS_PATH
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echo $(git fetch --all --verbose)
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echo $(git remote get-url origin)
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git checkout origin/$BRANCH_NAME
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if git show-ref --verify refs/remotes/origin/$BRANCH_NAME; then
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echo "Branch $BRANCH_NAME exists."
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else
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echo "::error::Branch $BRANCH_NAME does not exist on remote."
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exit 1
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fi
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NOTEBOOKS_LATEST_COMMIT=$(git rev-parse refs/remotes/origin/${{ env.BRANCH_NAME }})
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NOTEBOOKS_CURRENT_COMMIT=$(git rev-parse HEAD)
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cd ../..
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if [ "$NOTEBOOKS_LATEST_COMMIT" != "$NOTEBOOKS_CURRENT_COMMIT" ]; then
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echo "::error ::Submodule $NOTEBOOKS_PATH is not up to date with the ${{ env.BRANCH_NAME }} branch. Please update it."
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exit 1
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else
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echo "Submodule $NOTEBOOKS_PATH is up to date with the ${{ env.BRANCH_NAME }} branch."
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fi
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# Checking FAQs only on the develop branch.
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echo "Checking $FAQ_PATH for updates..."
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cd $FAQ_PATH
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FAQ_LATEST_COMMIT=$(git rev-parse origin/develop)
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FAQ_CURRENT_COMMIT=$(git rev-parse HEAD)
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cd ../..
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if [ "$FAQ_LATEST_COMMIT" != "$FAQ_CURRENT_COMMIT" ]; then
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echo "::error ::Submodule $FAQ_PATH is not up to date. Please update it."
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exit 1
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else
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echo "Submodule $FAQ_PATH is up to date."
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fi
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build:
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name: test ${{ matrix.python-version }} - ${{ matrix.platform }}
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runs-on: ${{ matrix.platform }}
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strategy:
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matrix:
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python-version: ['3.8', '3.9', '3.10', '3.11']
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python-version: ['3.9', '3.10', '3.11']
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platform: [ubuntu-latest, macos-latest, windows-latest]
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defaults:
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run:
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shell: bash
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env: # Set environment variables for the whole job
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PIP_ONLY_BINARY: gdstk
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MPLBACKEND: agg
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steps:
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- uses: actions/checkout@v1
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- uses: actions/checkout@v4
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#----------------------------------------------
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# ----- install & configure poetry -----
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#----------------------------------------------
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- name: Install Poetry
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uses: abatilo/actions-poetry@v2
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with:
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version: 1.7.1
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# After installing Poetry add to PATH
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- name: Add Poetry's bin directory to PATH
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run: |
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echo "$HOME/.local/bin" >> $GITHUB_PATH
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echo $(which poetry)
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echo $(poetry --version)
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- name: Set up Python ${{ matrix.python-version }}
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uses: actions/setup-python@v2
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uses: actions/setup-python@v5
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with:
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python-version: ${{ matrix.python-version }}
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- name: Install dependencies
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cache: "poetry" # caching poetry dependencies
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#----------------------------------------------
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# install your root project, if required
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#----------------------------------------------
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- name: Install library
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run: |
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poetry --version
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poetry install -E dev
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#----------------------------------------------
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# add matrix specifics and run test suite
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#----------------------------------------------
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- name: Run tests
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run: |
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python -m pip install --upgrade pip
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pip install tox-gh-actions
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pip install tox
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- name: Test with tox
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run: tox
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poetry run black . --check --diff
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poetry run ruff check tidy3d --fix --exit-non-zero-on-fix
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poetry run pytest -rA tests
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poetry run pytest -rA tests/test_data/_test_datasets_no_vtk.py

‎.github/workflows/sync-to-readthedocs-repo.yaml‎

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name: "sync-to-readthedocs-repo"
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permissions:
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contents: write
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on:
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push:
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branches:
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- main
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- latest
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- 'pre/*'
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- 'v*'
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workflow_dispatch:
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inputs:
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env:
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description: environment
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default: dev
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required: true
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jobs:
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extract_branch:
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outputs:
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branch: ${{ steps.extractbranch.outputs.branch }}
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runs-on: ubuntu-latest
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steps:
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- id: extractbranch
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name: Extract branch name
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shell: bash
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run: |
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echo "::set-output name=branch::${GITHUB_HEAD_REF:-${GITHUB_REF#refs/heads/}}"
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echo "${GITHUB_HEAD_REF:-${GITHUB_REF#refs/heads/}}"
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echo "${{ steps.extractbranch.outputs.branch }}"
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set_env:
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needs: extract_branch
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outputs:
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env: ${{ steps.setenv.outputs.env }}
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dest-branch: ${{ steps.dest-branch.outputs.branch }}
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runs-on: ubuntu-latest
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steps:
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- id: setenv
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run: |
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if [[ "${{ needs.extract_branch.outputs.branch }}" =~ ^v.*$ ]]
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then
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echo "::set-output name=env::version"
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echo "ENV=version" >> $GITHUB_ENV
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elif test -n "${{ github.event.inputs.env }}"
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then
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echo "::set-output name=env::${{ github.event.inputs.env }}"
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echo "ENV=${{ github.event.inputs.env }}" >> $GITHUB_ENV
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elif test "${{ github.event_name }}" = 'push' -a "${{ github.ref }}" = 'refs/heads/latest'
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then
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echo "::set-output name=env::dev"
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echo "ENV=dev" >> $GITHUB_ENV
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elif test "${{ github.event_name }}" = 'push' -a "${{ github.ref }}" = 'refs/heads/main'
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then
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echo "::set-output name=env::prod"
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echo "ENV=prod" >> $GITHUB_ENV
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else
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echo "::set-output name=env::dev"
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echo "ENV=dev" >> $GITHUB_ENV
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fi
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- id: dest-branch
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run: |
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echo "The destination branch is ${{ needs.extract_branch.outputs.branch }}"
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case ${{ env.ENV }} in
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version)
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new_branch_name="${{ needs.extract_branch.outputs.branch }}"
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echo "::set-output name=branch::${new_branch_name}"
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;;
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dev)
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echo "::set-output name=branch::${{ needs.extract_branch.outputs.branch }}"
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;;
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prod)
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echo "::set-output name=branch::main"
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;;
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esac
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build-and-deploy:
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needs: set_env
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runs-on: ubuntu-latest
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steps:
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- name: Checkout
80+
uses: actions/checkout@v3
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with:
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submodules: true
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- id: clean
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run: |
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rm -rf .github/ # removes the further triggered github actions.
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- name: Create new branch if version pattern
87+
uses: GuillaumeFalourd/create-other-repo-branch-action@v1.5
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with:
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repository_owner: flexcompute-readthedocs
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repository_name: tidy3d-docs
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new_branch_name: ${{ needs.set_env.outputs.dest-branch }}
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access_token: ${{ secrets.GH_PAT }}
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new_branch_ref: default_clean_sync_branch
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ignore_branch_exists: true
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- uses: JamesIves/github-pages-deploy-action@v4
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with:
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folder: .
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token: ${{ secrets.GH_PAT }}
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repository-name: flexcompute-readthedocs/tidy3d-docs
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target-folder: .
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branch: ${{ needs.set_env.outputs.dest-branch }}

‎.github/workflows/test_develop_cli.yaml‎

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name: test-develop-cli
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on:
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workflow_dispatch:
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push:
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branches: [ develop ]
7+
pull_request:
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branches:
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- develop
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- 'pre/*' # We should reduce the frequency of these builds to save resources since it tests the docs build which is pretty long.
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12+
jobs:
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test-dev-commands:
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strategy:
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matrix:
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os: [ubuntu-latest, macos-latest, windows-latest]
17+
runs-on: ${{ matrix.os }}
18+
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steps:
20+
- name: Checkout code
21+
uses: actions/checkout@v2
22+
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- name: Set up Python
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uses: actions/setup-python@v2
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with:
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python-version: '3.11'
27+
28+
- name: Install Dependencies
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run: |
30+
python -m pip install --upgrade pip
31+
pip install -e .[dev]
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- name: Ubuntu install Pandoc
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if: matrix.os == 'ubuntu-latest'
35+
run: sudo apt-get install pandoc
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- name: MacOS install Pandoc
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if: matrix.os == 'macos-latest'
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run: brew install pandoc
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- name: Windows install Pandoc
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if: matrix.os == 'windows-latest'
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run: choco install pandoc
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- name: Verify existing installations
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run: |
47+
python3 --version
48+
pipx --version
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#----------------------------------------------
51+
# ----- install & configure poetry -----
52+
#----------------------------------------------
53+
- name: Install Poetry
54+
uses: snok/install-poetry@v1
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with:
56+
version: 1.7.1
57+
virtualenvs-create: true
58+
virtualenvs-in-project: true
59+
60+
- name: Run install-dev-environment command
61+
run: |
62+
# Unsure if this is a valid command since it just guarantees things run on previous dependencies installation
63+
# TODO finish debugging installation without previous installation. Tricky on GH Actions on its own.
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tidy3d develop install-dev-environment
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- name: Run development test commands
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run: |
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poetry run pytest tests/test_cli/full_test_develop.py
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