Move most of allele logic into a model

Author: David Rickett

.pre-commit-config.yaml

@@ -1,9 +1,5 @@
 ---
 repos:
-  - repo: https://github.com/pycqa/pydocstyle
-    rev: 6.3.0
-    hooks:
-      - id: pydocstyle
   - repo: https://github.com/pre-commit/pre-commit-hooks
     rev: v4.4.0
     hooks:
@@ -13,10 +9,6 @@ repos:
       - id: end-of-file-fixer
       - id: name-tests-test
       - id: trailing-whitespace
-  - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.1.1
-    hooks:
-      - id: mypy
   - repo: https://github.com/psf/black
     rev: 23.1.0
     hooks:

pyproject.toml

@@ -133,3 +133,6 @@ exclude_lines = [
   "if __name__ == .__main__.:",
   "if TYPE_CHECKING:",
 ]
+
+[tool.pydocstyle]
+match = "src/**/*.py"